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Commit 67c4bc97 authored by Seungmin Kim's avatar Seungmin Kim
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Finalize build dependencies

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Pipeline #55767 passed
Stage: build
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Dockerfile
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...@@ -8,7 +8,6 @@ SHELL ["/bin/bash", "-o", "pipefail", "-c"] ...@@ -8,7 +8,6 @@ SHELL ["/bin/bash", "-o", "pipefail", "-c"]
USER $NB_UID USER $NB_UID
RUN mamba install -c conda-forge -c bioconda --yes \ RUN mamba install -c conda-forge -c bioconda --yes \
'astropy' \
'bowtie2' \ 'bowtie2' \
'code-server' \ 'code-server' \
'curl' \ 'curl' \
...@@ -52,6 +51,7 @@ RUN mamba install -c conda-forge -c bioconda --yes \ ...@@ -52,6 +51,7 @@ RUN mamba install -c conda-forge -c bioconda --yes \
keras-tuner \ keras-tuner \
deepspeed \ deepspeed \
'jupyter-ai[all]' \ 'jupyter-ai[all]' \
astropy \
visualdl \ visualdl \
scikit-commpy \ scikit-commpy \
bash_kernel \ bash_kernel \
......
Dockerfile_cuda
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− 1
View file @ 67c4bc97
...@@ -11,7 +11,6 @@ USER $NB_UID ...@@ -11,7 +11,6 @@ USER $NB_UID
ARG CONDA_OVERRIDE_CUDA="12.4" ARG CONDA_OVERRIDE_CUDA="12.4"
RUN mamba install -c conda-forge -c bioconda -c nvidia --yes \ RUN mamba install -c conda-forge -c bioconda -c nvidia --yes \
'astropy' \
'bowtie2' \ 'bowtie2' \
'code-server' \ 'code-server' \
'curl' \ 'curl' \
...@@ -73,6 +72,7 @@ RUN mamba install -c conda-forge -c bioconda -c nvidia --yes \ ...@@ -73,6 +72,7 @@ RUN mamba install -c conda-forge -c bioconda -c nvidia --yes \
keras-tuner \ keras-tuner \
deepspeed \ deepspeed \
'jupyter-ai[all]' \ 'jupyter-ai[all]' \
astropy \
visualdl \ visualdl \
scikit-commpy \ scikit-commpy \
bash_kernel \ bash_kernel \
......
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